BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B08LP1|AL426646
(747 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1355 1473 0.0
>3x_Contig1355
Length = 8652
Score = 1473 bits (743), Expect = 0.0
Identities = 746/747 (99%)
Strand = Plus / Plus
Query: 1 gcaatgttagctctgaatggaacccttgttggtgggtactcatgattcacaccgtgtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5600 gcaatgttagctctgaatggaacccttgttggtgggtactcatgattcacaccgtgtcta 5659
Query: 61 gcaataaaggccacatggaaatgctcagtttcatctgattttacacgagacaccgtgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 gcaataaaggccacatggaaatgctcagtttcatctgattttacacgagacaccgtgatt 5719
Query: 121 ggagaagaagtcttaccccaaggtgtttccatacacggaagaatggcaattggttccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5720 ggagaagaagtcttaccccaaggtgtttccatacacggaagaatggcaattggttccaaa 5779
Query: 181 caatccaaagtgtacaaaccagtaccgccaatgattcctagatcaatagtcccatcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5780 caatccaaagtgtacaaaccagtaccgccaatgattcctagatcaatagtcccatcaaaa 5839
Query: 241 gtctgaggtaactgcgtagaattcgtcattttaaagctgtagaatttcgggataacgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5840 gtctgaggtaactgcgtagaattcgtcattttaaagctgtagaatttcgggataacgtta 5899
Query: 301 aacttcctgacgaacgttttcataaaacgaataacgttgtaaagaggaactagaagagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5900 aacttcctgacgaacgttttcataaaacgaataacgttgtaaagaggaactagaagagtt 5959
Query: 361 ttggttcaccagatcagatttgaaaggactaatttacagacagttttatttaaattaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5960 ttggttcaccagatcagatttgaaaggactaatttacagacagttttatttaaattaatg 6019
Query: 421 catgcatgcgctcattgtaaacttttctgaagatggagatgagcattcgagagaaaacgc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6020 catgcatgcgctcattgtaaacttttctgaagatggagatgagcattcgagagacaacgc 6079
Query: 481 aggtgaaaaaaaatgaataatcacgtgctcttcttctttttcttttgtttcaatgatact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6080 aggtgaaaaaaaatgaataatcacgtgctcttcttctttttcttttgtttcaatgatact 6139
Query: 541 attaaaaagacacaattattaacagaacctagcttctaagactatgcttttaattgcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6140 attaaaaagacacaattattaacagaacctagcttctaagactatgcttttaattgcata 6199
Query: 601 aatgatttttgtatagttgtaggtatactaaagttggaatttggaatttctggttatcgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6200 aatgatttttgtatagttgtaggtatactaaagttggaatttggaatttctggttatcgc 6259
Query: 661 agtatttacaggaatgaggatggggtagtcgaaaaccttccaaaccttccaaacattgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6260 agtatttacaggaatgaggatggggtagtcgaaaaccttccaaaccttccaaacattgat 6319
Query: 721 atatgtataaatattcttctcttcgca 747
|||||||||||||||||||||||||||
Sbjct: 6320 atatgtataaatattcttctcttcgca 6346
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7326
Number of Sequences: 1807
Number of extensions: 7326
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 747
length of database: 10,358,551
effective HSP length: 16
effective length of query: 731
effective length of database: 10,329,639
effective search space: 7550966109
effective search space used: 7550966109
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)